Sacu_v1.1_s0059.g015171


Description : not classified & original description: CDS=1-1305


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0059.g015171

Target Alias Description ECC score Gene Family Method Actions
Adi_g015735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02596 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05696 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21583 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03749 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0043.g027128 No alias not classified & original description: CDS=146-1684 0.04 OrthoFinder output from all 47 species
Azfi_s0090.g042642 No alias not classified & original description: CDS=39-695 0.05 OrthoFinder output from all 47 species
Azfi_s0270.g061187 No alias not classified & original description: CDS=1-3441 0.04 OrthoFinder output from all 47 species
Ceric.02G028200.1 OTP84, Ceric.02G028200 not classified & original description: pacid=50583866... 0.04 OrthoFinder output from all 47 species
Ceric.15G056400.1 Ceric.15G056400 not classified & original description: pacid=50639467... 0.03 OrthoFinder output from all 47 species
Ceric.1Z254100.1 Ceric.1Z254100 not classified & original description: pacid=50632850... 0.04 OrthoFinder output from all 47 species
Ceric.28G001700.1 Ceric.28G001700 not classified & original description: pacid=50570577... 0.04 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.04 OrthoFinder output from all 47 species
Dac_g04861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05532 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20365 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06287 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014727001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
Gb_20571 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
LOC_Os05g45850.1 LOC_Os05g45850 Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
Len_g44148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10257685g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
MA_107356g0010 CRR2 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_112066g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_114722g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_122606g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_130735g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_14659g0010 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_20782g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
MA_49292g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_7691g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_958908g0010 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Msp_g44897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01804 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65865 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011566 No alias not classified & original description: CDS=1-2082 0.03 OrthoFinder output from all 47 species
Sam_g22788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e008200_P001 Zm00001e008200 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Zm00001e020442_P001 Zm00001e020442 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Zm00001e021453_P001 CRR28, Zm00001e021453 Pentatricopeptide repeat-containing protein At5g06540... 0.04 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 58 82
IPR002885 Pentatricopeptide_repeat 287 334
IPR002885 Pentatricopeptide_repeat 83 130
IPR002885 Pentatricopeptide_repeat 186 233
No external refs found!