- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : pectin methylesterase & original description: CDS=460-1611
Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00264370 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G36710 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G07410 | No alias | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G07420 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g17897 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g20723 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g37630 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g38864 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g11400 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02507 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g20106 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g26785 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene16818.t1 | Aspi01Gene16818 | pectin methylesterase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene59353.t1 | Aspi01Gene59353 | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g008131 | No alias | pectin methylesterase & original description: CDS=1-870 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0109.g045336 | No alias | pectin methylesterase & original description: CDS=343-1428 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g03729 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g11546 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G017300.1 | Ceric.14G017300 | pectin methylesterase & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.19G035900.1 | Ceric.19G035900 | pectin methylesterase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07472 | No alias | pectin methylesterase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g42904 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g51244 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08073 | QRT1 | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18839 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014641001 | QRT1 | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_08496 | No alias | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Gb_23209 | No alias | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Gb_39595 | No alias | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g53990.1 | LOC_Os01g53990 | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g44600.1 | LOC_Os05g44600 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10428207g0020 | No alias | Probable pectinesterase 53 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_14449g0010 | No alias | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
| MA_19196g0010 | ATPE11, PE11 | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
| MA_6149868g0010 | No alias | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
| MA_7274893g0010 | No alias | Putative pectinesterase 11 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
| Mp1g17560.1 | No alias | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g01420.1 | No alias | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g01190.1 | No alias | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g08012 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g06428 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g27386 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g29702 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30829 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g39490 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g42824 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20339 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g21379 | No alias | pectin methylesterase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g31349 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g14779 | No alias | pectin methylesterase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g25901 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31507 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g61465 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0066.g016099 | No alias | pectin methylesterase & original description: CDS=1-1224 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0066.g016132 | No alias | pectin methylesterase & original description: CDS=1-684 | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g05107 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g075620.4.1 | Solyc02g075620 | pectin methylesterase | 0.01 | OrthoFinder output from all 47 species | |
| Solyc12g008530.2.1 | Solyc12g008530 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g37234 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g38344 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007306_P001 | Zm00001e007306 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029074_P001 | Zm00001e029074 | pectin methylesterase | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e040018_P001 | Zm00001e040018 | pectin methylesterase | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004097 | catechol oxidase activity | IEP | HCCA |
| MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | HCCA |
| MF | GO:0004451 | isocitrate lyase activity | IEP | HCCA |
| MF | GO:0004620 | phospholipase activity | IEP | HCCA |
| MF | GO:0004629 | phospholipase C activity | IEP | HCCA |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | HCCA |
| MF | GO:0016298 | lipase activity | IEP | HCCA |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | HCCA |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016833 | oxo-acid-lyase activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |