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Description : splicing factor *(CFM9) & original description: CDS=69-1580
Gene families : OG0001914 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001914_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0059.g015065 | |
| Cluster | HCCA: Cluster_20 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G13070 | No alias | RNA-binding CRS1 / YhbY (CRM) domain protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g008013 | No alias | splicing factor *(CFM9) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09890 | No alias | splicing factor *(CFM9) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g02832 | No alias | splicing factor *(CFM9) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g08828 | No alias | splicing factor *(CFM9) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g49602 | No alias | splicing factor *(CFM9) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| MF | GO:0005047 | signal recognition particle binding | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| CC | GO:0005785 | signal recognition particle receptor complex | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001890 | RNA-binding_CRM | 158 | 241 |
| No external refs found! |