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  5. Sacu_v1.1_s0058.g015010

Sacu_v1.1_s0058.g015010 (ATRPA70A, RPA1A,...)


Aliases : ATRPA70A, RPA1A, ATRPA1A, RPA70A

Description : component *(RPA1) of RPA presynaptic filament assembly factor complex & original description: CDS=110-2590


Gene families : OG0002229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002229_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0058.g015010

Target Alias Description ECC score Gene Family Method Actions
Als_g07746 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
InterPro domains Description Start Stop
IPR007199 Rep_factor-A_N 5 101
IPR001878 Znf_CCHC 779 794
IPR013955 Rep_factor-A_C 527 676
IPR031657 REPA_OB_2 365 469
IPR004365 NA-bd_OB_tRNA 255 329
No external refs found!