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  5. Sacu_v1.1_s0057.g014788

Sacu_v1.1_s0057.g014788


Description : not classified & original description: CDS=1-498


Gene families : OG0001159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0057.g014788

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01017284001 No alias No description available 0.01 OrthoFinder output from all 47 species
Ore_g30062 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g088010.1.1 Solyc01g088010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g103590.4.1 Solyc01g103590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045337 farnesyl diphosphate biosynthetic process IEP HCCA
BP GO:0045338 farnesyl diphosphate metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:1902767 isoprenoid biosynthetic process via mevalonate IEP HCCA
InterPro domains Description Start Stop
IPR004360 Glyas_Fos-R_dOase_dom 13 153
No external refs found!