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  5. Sacu_v1.1_s0056.g014640

Sacu_v1.1_s0056.g014640 (NF-YB3)


Aliases : NF-YB3

Description : component *(NF-YB) of NF-Y transcription factor complex & original description: CDS=256-828


Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0056.g014640

Target Alias Description ECC score Gene Family Method Actions
Adi_g020740 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Adi_g021371 NF-YB8 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Adi_g078591 EMB212, NF-YB9,... transcription factor *(LEC) involved in seed maturation... 0.02 OrthoFinder output from all 47 species
Lfl_g39312 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Pir_g00882 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
Sam_g07510 No alias component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Sam_g42238 No alias transcription factor *(LEC) involved in seed maturation... 0.02 OrthoFinder output from all 47 species
Spa_g04914 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Tin_g26844 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Zm00001e027268_P001 NF-YB10, Zm00001e027268 component NF-YB of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0032784 regulation of DNA-templated transcription elongation IEP HCCA
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP HCCA
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP HCCA
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 37 101
No external refs found!