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  5. Sacu_v1.1_s0056.g014535

Sacu_v1.1_s0056.g014535


Description : not classified & original description: CDS=1-1842


Gene families : OG0001358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0056.g014535

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0001.g000245 No alias not classified & original description: CDS=137-1642 0.03 OrthoFinder output from all 47 species
Zm00001e012419_P002 Zm00001e012419 VAN3-binding protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
InterPro domains Description Start Stop
IPR008546 VAN3-bd-like_auxin_canal 291 475
IPR008546 VAN3-bd-like_auxin_canal 36 122
IPR013666 PH_pln 507 608
No external refs found!