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Aliases : UBQ6
Description : not classified & original description: CDS=1-258
Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00017p00094950 | UBQ6,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | OrthoFinder output from all 47 species | |
| AMTR_s00095p00146440 | UBQ6,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G23410 | No alias | Ribosomal protein S27a / Ubiquitin family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G36170 | No alias | Ubiquitin supergroup;Ribosomal protein L40e | 0.05 | OrthoFinder output from all 47 species | |
| AT2G47110 | UBQ6 | ubiquitin 6 | 0.1 | OrthoFinder output from all 47 species | |
| AT3G52590 | UBQ1, EMB2167,... | ubiquitin extension protein 1 | 0.1 | OrthoFinder output from all 47 species | |
| AT3G62250 | UBQ5 | ubiquitin 5 | 0.11 | OrthoFinder output from all 47 species | |
| Ala_g22856 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g31252 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g30723 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g23546 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g45522 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.08G035500.1 | Ceric.08G035500 | component *(eL40) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.15G076600.1 | UBQ14, Ceric.15G076600 | UBQ ubiquitin-fold protein & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.21G057400.1 | UBQ6, Ceric.21G057400 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.27G040600.1 | Ceric.27G040600 | component *(eL40) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.36G032100.1 | RUB1, ATRUB1,... | RUB ubiquitin-fold protein & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00022075.50 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Cre01.g007051 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Cre06.g273600 | UBQ6 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Dac_g08496 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g17740 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26143 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g38726 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012906001 | No alias | Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01028198001 | No alias | Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033876001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01038617001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.13 | OrthoFinder output from all 47 species | |
| Gb_15027 | UBQ6 | component RPS27a of SSU proteome | 0.12 | OrthoFinder output from all 47 species | |
| Gb_40288 | UBQ6 | component RPS27a of SSU proteome | 0.1 | OrthoFinder output from all 47 species | |
| Gb_41257 | No alias | component RPL40 of LSU proteome component | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os01g22490.1 | UBQ6, LOC_Os01g22490 | component RPS27a of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g13170.1 | LOC_Os03g13170 | component RPL40 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g06770.1 | UBQ6, LOC_Os05g06770 | component RPS27a of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g39500.1 | LOC_Os09g39500 | component RPL40 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g23474 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g23519 | UBQ14 | UBQ ubiquitin-fold protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10435699g0020 | UBQ6 | component RPS27a of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| MA_13101g0020 | No alias | component RPL40 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| MA_529552g0010 | UBQ6 | component RPS27a of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
| MA_9129425g0010 | No alias | component RPL40 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g02760.1 | No alias | Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare... | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g12490.1 | No alias | component RPL40 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g12760.1 | UBQ6 | component RPS27a of SSU proteome | 0.07 | OrthoFinder output from all 47 species | |
| Mp8g00780.1 | No alias | component RPL40 of LSU proteome component | 0.1 | OrthoFinder output from all 47 species | |
| Msp_g38968 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g16243 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g23785 | RUB1, ATRUB1, NEDD8 | UBQ ubiquitin-fold protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02418 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g48632 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c10_25270V3.1 | Pp3c10_25270 | ubiquitin extension protein 1 | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c12_5640V3.1 | UBQ6, Pp3c12_5640 | ubiquitin 6 | 0.09 | OrthoFinder output from all 47 species | |
| Pp3c12_5760V3.1 | UBQ6, Pp3c12_5760 | ubiquitin 6 | 0.07 | OrthoFinder output from all 47 species | |
| Pp3c20_23170V3.1 | Pp3c20_23170 | ubiquitin extension protein 1 | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c24_430V3.1 | Pp3c24_430 | ubiquitin extension protein 1 | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c4_19000V3.1 | UBQ6, Pp3c4_19000 | ubiquitin 6 | 0.09 | OrthoFinder output from all 47 species | |
| Pp3c8_14230V3.1 | UBQ6, Pp3c8_14230 | ubiquitin 6 | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05460 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g24560 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07359 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07360 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Sam_g07364 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g20114 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g26881 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Smo111605 | UBQ6 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc01g068045.1.1 | UBQ6, Solyc01g068045 | component RPS27a of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| Solyc03g082570.4.1 | Solyc03g082570 | component RPL40 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| Solyc08g008590.4.1 | Solyc08g008590 | component RPL40 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g083120.3.1 | Solyc08g083120 | component RPL40 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g098940.2.1 | UBQ6, Solyc12g098940 | component RPS27a of SSU proteome | 0.09 | OrthoFinder output from all 47 species | |
| Solyc12g099025.1.1 | UBQ6, Solyc12g099025 | component RPS27a of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g02055 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g29603 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g29979 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g43571 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g56402 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g28918 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000962_P001 | Zm00001e000962 | component RPL40 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009474_P001 | Zm00001e009474 | component RPL40 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e026237_P001 | UBQ6, Zm00001e026237 | component RPS27a of SSU proteome | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004664 | prephenate dehydratase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006558 | L-phenylalanine metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008134 | transcription factor binding | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
| BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | HCCA |
| BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| MF | GO:0017025 | TBP-class protein binding | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | HCCA |
| BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |