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  5. Sacu_v1.1_s0055.g014347

Sacu_v1.1_s0055.g014347


Description : D-arabinose-5-phosphate isomerase & original description: CDS=329-1396


Gene families : OG0006389 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006389_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0055.g014347

Target Alias Description ECC score Gene Family Method Actions
Adi_g023295 No alias D-arabinose-5-phosphate isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17580 No alias D-arabinose-5-phosphate isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39190 No alias D-arabinose-5-phosphate isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27664 No alias D-arabinose-5-phosphate isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12708 No alias D-arabinose-5-phosphate isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Gb_20861 No alias D-arabinose-5-phosphate isomerase 0.03 OrthoFinder output from all 47 species
Lfl_g05277 No alias D-arabinose-5-phosphate isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01638 No alias D-arabinose-5-phosphate isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19861 No alias D-arabinose-5-phosphate isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17993 No alias D-arabinose-5-phosphate isomerase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0097367 carbohydrate derivative binding IEA Interproscan
BP GO:1901135 carbohydrate derivative metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR001347 SIS_dom 74 200
IPR000644 CBS_dom 232 287
IPR000644 CBS_dom 299 352
No external refs found!