1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0055.g014342

Sacu_v1.1_s0055.g014342


Description : not classified & original description: CDS=1-1818


Gene families : OG0014354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014354_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0055.g014342

Target Alias Description ECC score Gene Family Method Actions
Als_g05674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19558 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g08852 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25621 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g31922 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0030008 TRAPP complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 232 262
IPR002885 Pentatricopeptide_repeat 421 445
IPR002885 Pentatricopeptide_repeat 552 570
IPR002885 Pentatricopeptide_repeat 521 546
IPR002885 Pentatricopeptide_repeat 204 224
IPR002885 Pentatricopeptide_repeat 131 176
No external refs found!