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  5. Sacu_v1.1_s0054.g014202

Sacu_v1.1_s0054.g014202 (NEF1)


Aliases : NEF1

Description : exine patterning factor *(NEF1) & original description: CDS=275-3568


Gene families : OG0004275 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0054.g014202
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT5G13390 NEF1 no exine formation 1 0.03 OrthoFinder output from all 47 species
Adi_g087227 NEF1 exine patterning factor *(NEF1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01840 NEF1 exine patterning factor *(NEF1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001111001 NEF1 Cell wall.sporopollenin.exine wall formation.NEF1 exine... 0.03 OrthoFinder output from all 47 species
Gb_19950 NEF1 exine patterning factor (NEF1) 0.02 OrthoFinder output from all 47 species
Solyc11g033282.1.1 NEF1, Solyc11g033282 exine patterning factor (NEF1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!