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  5. Sacu_v1.1_s0053.g014168

Sacu_v1.1_s0053.g014168


Description : not classified & original description: CDS=1-1884


Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0053.g014168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00164330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AT2G29660 No alias zinc finger (C2H2 type) family protein 0.03 OrthoFinder output from all 47 species
AT5G54630 No alias zinc finger protein-related 0.02 OrthoFinder output from all 47 species
Aev_g16997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10004.t1 Aspi01Gene10004 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29956.t1 Aspi01Gene29956 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0305.g063895 No alias not classified & original description: CDS=1048-1284 0.05 OrthoFinder output from all 47 species
Ceric.39G048600.1 Ceric.39G048600 not classified & original description: pacid=50582455... 0.03 OrthoFinder output from all 47 species
Gb_30270 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Gb_32897 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os01g57650.1 LOC_Os01g57650 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os03g15790.1 LOC_Os03g15790 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os04g59380.1 LOC_Os04g59380 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_525155g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Mp3g21490.1 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Nbi_g13043 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo15610 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Solyc02g079920.3.1 Solyc02g079920 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc07g063970.3.1 Solyc07g063970 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Spa_g50745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008786_P002 Zm00001e008786 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e019606_P002 Zm00001e019606 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e040454_P002 Zm00001e040454 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005542 folic acid binding IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!