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  5. Sacu_v1.1_s0053.g014146

Sacu_v1.1_s0053.g014146


Description : E3 ubiquitin ligase *(DRR1) & original description: CDS=167-1540


Gene families : OG0001028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0053.g014146

Target Alias Description ECC score Gene Family Method Actions
Adi_g055551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45051.t1 Aspi01Gene45051 E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65058.t1 Aspi01Gene65058 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g08340.1 LOC_Os01g08340 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Len_g15965 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429119g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e031174_P001 Zm00001e031174 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 404 445
No external refs found!