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  5. Sacu_v1.1_s0053.g014135

Sacu_v1.1_s0053.g014135


Description : not classified & original description: CDS=56-8230


Gene families : OG0004400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0053.g014135
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT4G30990 No alias ARM repeat superfamily protein 0.05 OrthoFinder output from all 47 species
Azfi_s0105.g044994 No alias not classified & original description: CDS=23-8209 0.06 OrthoFinder output from all 47 species
Cba_g33672 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000137.1 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g40250.1 LOC_Os01g40250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10428483g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc09g092240.3.1 Solyc09g092240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g27076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR046523 UTP20_C 1793 2009
IPR011430 UTP20_N 945 1574
No external refs found!