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  5. Sacu_v1.1_s0053.g014125

Sacu_v1.1_s0053.g014125


Description : not classified & original description: CDS=134-1198


Gene families : OG0010665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010665_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0053.g014125

Target Alias Description ECC score Gene Family Method Actions
Ala_g18258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g00728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13605 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene16739.t1 Aspi01Gene16739 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0047.g030304 No alias not classified & original description: CDS=322-1431 0.06 OrthoFinder output from all 47 species
Ceric.39G057800.1 Ceric.39G057800 not classified & original description: pacid=50583048... 0.07 OrthoFinder output from all 47 species
Dac_g00657 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g02216 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g11103 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10286 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g01061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05533 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g12144 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!