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  5. Sacu_v1.1_s0051.g013976

Sacu_v1.1_s0051.g013976 (LD)


Aliases : LD

Description : flowering time factor *(LD) & original description: CDS=188-3766


Gene families : OG0006989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006989_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0051.g013976
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Aev_g18967 LD regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ceric.26G026900.1 LD, Ceric.26G026900 flowering time factor *(LD) & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g13836 LD flowering time factor *(LD) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02445 LD flowering time factor *(LD) & original description: none 0.04 OrthoFinder output from all 47 species
Mp5g13160.1 LD transcription factor (LD). C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Pir_g18899 LD flowering time factor *(LD) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13910 LD flowering time factor *(LD) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018725_P004 LD, Zm00001e018725 transcription factor (LD) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA

No InterPro domains available for this sequence

No external refs found!