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  5. Sacu_v1.1_s0051.g013965

Sacu_v1.1_s0051.g013965


Description : not classified & original description: CDS=25-1119


Gene families : OG0000047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0051.g013965

Target Alias Description ECC score Gene Family Method Actions
Aop_g15118 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene04444.t1 Aspi01Gene04444 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58557.t1 Aspi01Gene58557 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0082.g038746 No alias not classified & original description: CDS=1-861 0.03 OrthoFinder output from all 47 species
Cba_g02854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76026 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g04172 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g19070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g46090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045337 farnesyl diphosphate biosynthetic process IEP HCCA
BP GO:0045338 farnesyl diphosphate metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:1902767 isoprenoid biosynthetic process via mevalonate IEP HCCA

No InterPro domains available for this sequence

No external refs found!