Solyc09g090370.3.1 (Solyc09g090370.3)


Aliases : Solyc09g090370.3

Description : 27.3.52 RNA.regulation of transcription.Global transcription factor group Bromodomain containing nuclear-localized protein involved in leaf development. GTE6 binds to the promoter and intron of AS1 and regulates its expression via histone acetylation. general transcription factor group E6 (GTE6)


Gene families : OG_01_0000231 (Gene family) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc09g090370.3.1
Cluster HCCA cluster: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
AT1G06230 GTE4 global transcription factor group E4 0.02 Gene family
AT2G34900 GTE1, GTE01, IMB1 Transcription factor GTE6 0.04 Gene family
Cpa|evm.model.tig00000632.12 No alias No description available 0.02 Gene family
Cre08.g367300 No alias 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
GSVIVT01001835001 No alias 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
GSVIVT01014233001 No alias 27.3.52 RNA.regulation of transcription.Global... 0.07 Gene family
GSVIVT01020670001 No alias 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family
GSVIVT01034328001 No alias No description available 0.04 Gene family
LOC_Os01g11580 Os01g0214300 27.3.52 RNA.regulation of transcription.Global... 0.05 Gene family
LOC_Os02g15220 Os02g0250300 27.3.52 RNA.regulation of transcription.Global... 0.04 Gene family
LOC_Os07g32420 Os07g0507700 27.3.52 RNA.regulation of transcription.Global... 0.05 Gene family
MA_87057g0010 No alias 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
Zm00001d004790 GRMZM2G169688 27.3.52 RNA.regulation of transcription.Global... 0.05 Gene family
Zm00001d017126 GRMZM2G006707 35.2 not assigned.unknown Encodes NPX1 (Nuclear Protein... 0.03 Gene family
Zm00001d026333 GRMZM2G396846 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
Zm00001d049638 GRMZM2G351382 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family
Zm00001d053022 GRMZM2G317652 27.3.52 RNA.regulation of transcription.Global... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001487 Bromodomain 105 190
IPR027353 NET_dom 264 326
No external refs found!