1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0051.g013941

Sacu_v1.1_s0051.g013941


Description : not classified & original description: CDS=1-1122


Gene families : OG0007862 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007862_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0051.g013941

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00129550 evm_27.TU.AmTr_v1... Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.05 OrthoFinder output from all 47 species
AT4G28740 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
Als_g11403 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07202 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g02132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70838.t1 Aspi01Gene70838 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g266900 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dac_g07193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09067 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g16984 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028479001 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os04g42800.1 LOC_Os04g42800 Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Len_g09241 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g01177 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_173127g0010 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Mp7g15330.1 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Pir_g19021 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g10680 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22705 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g00565 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021883 LPA1-like 117 192
No external refs found!