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  5. Sacu_v1.1_s0050.g013885

Sacu_v1.1_s0050.g013885


Description : not classified & original description: CDS=1-2919


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0050.g013885

Target Alias Description ECC score Gene Family Method Actions
Adi_g007222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47369.t1 Aspi01Gene47369 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24062 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032736001 No alias B2 protein OS=Daucus carota 0.03 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.02 OrthoFinder output from all 47 species
LOC_Os11g32270.1 LOC_Os11g32270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g20732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25333 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55853 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g41489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g42263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020733_P001 Zm00001e020733 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 266.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR002934 Polymerase_NTP_transf_dom 601 633
IPR013989 Dev_and_cell_death_domain 147 258
No external refs found!