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  5. Sacu_v1.1_s0050.g013828

Sacu_v1.1_s0050.g013828 (RFI2)


Aliases : RFI2

Description : E3 ubiquitin ligase *(RFI2) & original description: CDS=264-1613


Gene families : OG0000823 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000823_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0050.g013828

Target Alias Description ECC score Gene Family Method Actions
Adi_g077314 RFI2 E3 ubiquitin ligase *(RFI2) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34750 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01213 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16442 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23679 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g28755 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28756 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 18 65
No external refs found!