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  5. Sacu_v1.1_s0049.g013668

Sacu_v1.1_s0049.g013668


Description : not classified & original description: CDS=441-1991


Gene families : OG0002641 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002641_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0049.g013668
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0045.g030012 No alias not classified & original description: CDS=457-1959 0.04 OrthoFinder output from all 47 species
Ceric.36G001500.1 Ceric.36G001500 not classified & original description: pacid=50569009... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021168.59 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01034414001 No alias No description available 0.04 OrthoFinder output from all 47 species
Nbi_g11433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008547 DUF829_TMEM53 230 489
No external refs found!