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  5. Sacu_v1.1_s0048.g013617

Sacu_v1.1_s0048.g013617


Description : not classified & original description: CDS=425-1780


Gene families : OG0006027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0048.g013617

Target Alias Description ECC score Gene Family Method Actions
Ceric.09G086500.1 Ceric.09G086500 not classified & original description: pacid=50586673... 0.04 OrthoFinder output from all 47 species
Dcu_g04687 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16155 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_39400 No alias Protein HLB1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g02270.1 LOC_Os03g02270 Protein HLB1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g37430.1 LOC_Os10g37430 Protein HLB1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g04818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g083070.3.1 Solyc08g083070 Protein HLB1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e004352_P003 Zm00001e004352 Protein HLB1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e012530_P002 Zm00001e012530 Protein HLB1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA

No InterPro domains available for this sequence

No external refs found!