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  5. Sacu_v1.1_s0046.g013393

Sacu_v1.1_s0046.g013393


Description : not classified & original description: CDS=172-1155


Gene families : OG0000943 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000943_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0046.g013393

Target Alias Description ECC score Gene Family Method Actions
AT2G33550 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aob_g05868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_39525 No alias Trihelix transcription factor ASR3 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Mp1g06180.1 No alias Trihelix transcription factor ASR3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g06851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03504 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g045430.4.1 Solyc04g045430 Trihelix transcription factor ASR3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g12904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014653_P002 Zm00001e014653 Trihelix transcription factor ASR3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e022580_P001 Zm00001e022580 Trihelix transcription factor ASR3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005542 folic acid binding IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 54 141
No external refs found!