Solyc09g089890.1.1 (Solyc09g089890.1)


Aliases : Solyc09g089890.1

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc09g089890.1.1
Cluster HCCA cluster: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT2G44578 No alias RING/U-box superfamily protein 0.03 Gene family
AT3G03550 No alias RING/U-box superfamily protein 0.05 Gene family
GSVIVT01009096001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01028306001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os02g52210 Os02g0759400 No description available 0.03 Gene family
LOC_Os03g44636 Os03g0648600 No description available 0.03 Gene family
LOC_Os04g37740 Os04g0450400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os08g44950 Os08g0563500 No description available 0.04 Gene family
LOC_Os09g29310 Os09g0468300 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
LOC_Os10g41660 Os10g0566400 No description available 0.04 Gene family
MA_10436650g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_12363g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
MA_144298g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
MA_611616g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_904294g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc01g066430.3.1 Solyc01g066430.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc03g112340.1.1 Solyc03g112340.1 No description available 0.04 Gene family
Solyc06g053640.1.1 Solyc06g053640.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc12g055710.1.1 Solyc12g055710.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d016139 GRMZM2G098925 No description available 0.03 Gene family
Zm00001d016140 GRMZM2G358711 No description available 0.03 Gene family
Zm00001d020789 GRMZM2G082653 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d027685 GRMZM2G056804 No description available 0.04 Gene family
Zm00001d027983 GRMZM2G148706 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.03 Gene family
Zm00001d029438 GRMZM2G049070 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d037019 GRMZM2G026562 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL43 0.02 Gene family
Zm00001d038420 GRMZM2G075782 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d052341 GRMZM2G033089 No description available 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 127 170
No external refs found!