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  5. Sacu_v1.1_s0045.g013291

Sacu_v1.1_s0045.g013291 (SCL-3, SCL3)


Aliases : SCL-3, SCL3

Description : GRAS-type transcription factor & original description: CDS=1-1569


Gene families : OG0004383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0045.g013291
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00128820 SCL-3, SCL3,... RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
Aev_g14118 SCL-3, SCL3 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47817.t1 SCL-3, SCL3,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001177 SCL-3, SCL3 GRAS-type transcription factor & original description: CDS=1-1836 0.03 OrthoFinder output from all 47 species
Dde_g51219 SCL-3, SCL3 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g71970.1 SCL-3, SCL3,... transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
MA_959414g0010 SCL-3, SCL3 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Pnu_g21418 SCL-3, SCL3 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 100 449
No external refs found!