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  5. Sacu_v1.1_s0045.g013183

Sacu_v1.1_s0045.g013183


Description : subfamily ABCG transporter & original description: CDS=554-3865


Gene families : OG0001702 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0045.g013183

Target Alias Description ECC score Gene Family Method Actions
AT2G37010 ATNAP12, NAP12 non-intrinsic ABC protein 12 0.03 OrthoFinder output from all 47 species
Aspi01Gene72406.t2 Aspi01Gene72406 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0075.g037686 No alias subfamily ABCG transporter & original description: CDS=355-3330 0.04 OrthoFinder output from all 47 species
Azfi_s0272.g061270 No alias subfamily ABCG transporter & original description: CDS=338-3691 0.03 OrthoFinder output from all 47 species
Azfi_s0380.g067358 No alias subfamily ABCG transporter & original description: CDS=43-3537 0.05 OrthoFinder output from all 47 species
LOC_Os10g30610.1 LOC_Os10g30610 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Ppi_g05945 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29270 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g075020.3.1 Solyc06g075020 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e008651_P001 Zm00001e008651 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e037060_P003 Zm00001e037060 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0016093 polyprenol metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0019348 dolichol metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR043926 ABCG_dom 693 1100
IPR003439 ABC_transporter-like_ATP-bd 514 664
No external refs found!