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  5. Sacu_v1.1_s0045.g013146

Sacu_v1.1_s0045.g013146


Description : not classified & original description: CDS=300-1316


Gene families : OG0001529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001529_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0045.g013146
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene64472.t1 Aspi01Gene64472 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G071500.1 Ceric.25G071500 not classified & original description: pacid=50593861... 0.04 OrthoFinder output from all 47 species
Ceric.31G059400.1 Ceric.31G059400 not classified & original description: pacid=50573830... 0.03 OrthoFinder output from all 47 species
LOC_Os04g33860.1 LOC_Os04g33860 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g04637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g50480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!