Sacu_v1.1_s0044.g013119 (GIF3)


Aliases : GIF3

Description : cofactor component *(GIF) of GRF-GIF transcriptional complex & original description: CDS=1-801


Gene families : OG0001681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001681_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0044.g013119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00157130 GIF1, GIF,... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 OrthoFinder output from all 47 species
AMTR_s00121p00019250 GIF3,... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 OrthoFinder output from all 47 species
Als_g08181 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Ceric.03G033900.1 GIF3, Ceric.03G033900 cofactor component *(GIF) of GRF-GIF transcriptional... 0.04 OrthoFinder output from all 47 species
Dcu_g03501 GIF1, GIF, ATGIF1, AN3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
GSVIVT01036262001 GIF1, GIF, ATGIF1, AN3 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.02 OrthoFinder output from all 47 species
LOC_Os11g40100.3 GIF3, LOC_Os11g40100 cofactor component GIF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
MA_88944g0010 GIF3 cofactor component GIF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
Sam_g06466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo414798 GIF3 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 OrthoFinder output from all 47 species
Spa_g53256 GIF1, GIF, ATGIF1, AN3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.02 OrthoFinder output from all 47 species
Zm00001e005583_P001 GIF1, GIF,... cofactor component GIF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
InterPro domains Description Start Stop
IPR007726 SS18_N 81 126
No external refs found!