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  5. Sacu_v1.1_s0044.g013025

Sacu_v1.1_s0044.g013025


Description : co-chaperone *(Hsp40) & original description: CDS=294-1304


Gene families : OG0000319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0044.g013025

Target Alias Description ECC score Gene Family Method Actions
AT5G25530 No alias DNAJ heat shock family protein 0.03 OrthoFinder output from all 47 species
Dde_g05772 No alias co-chaperone *(Hsp40) & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os08g28700.1 LOC_Os08g28700 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
Pnu_g04341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019095_P003 Zm00001e019095 Chaperone protein dnaJ 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008452 RNA ligase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 4 67
IPR002939 DnaJ_C 160 318
No external refs found!