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  5. Sacu_v1.1_s0043.g012894

Sacu_v1.1_s0043.g012894


Description : not classified & original description: CDS=1-1188


Gene families : OG0001617 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001617_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0043.g012894
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Aev_g03115 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Ala_g01316 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Ceric.30G072500.1 Ceric.30G072500 not classified & original description: pacid=50608335... 0.04 OrthoFinder output from all 47 species
Dcu_g01139 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g24895 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Gb_04488 No alias proteolytic chalcone synthase regulator (KFB-CHS).... 0.04 OrthoFinder output from all 47 species
MA_10430159g0010 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
MA_48603g0010 No alias component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
Pnu_g02766 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Pnu_g24086 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Pnu_g25256 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Solyc06g083550.1.1 Solyc06g083550 component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA

No InterPro domains available for this sequence

No external refs found!