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  5. Sacu_v1.1_s0043.g012864

Sacu_v1.1_s0043.g012864


Description : GTPase effector *(BDR) & original description: CDS=941-2152


Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0043.g012864

Target Alias Description ECC score Gene Family Method Actions
Adi_g063519 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07263 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05740 No alias GTPase effector *(BDR) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01009382001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os10g27110.1 LOC_Os10g27110 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Nbi_g03609 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06945 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14757 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g078190.4.1 Solyc04g078190 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g01533 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44481 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006873 DUF620 134 373
No external refs found!