Sacu_v1.1_s0043.g012859 (UBP18)

Aliases : UBP18

Description : not classified & original description: CDS=628-2634

Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0043.g012859

Target	Alias	Description	ECC score	Gene Family Method
Als_g27096	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g13254	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g14993	UBP23	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000711.8	UBP25	Protein degradation.peptidase families.cysteine-type...	0.01	OrthoFinder output from all 47 species
Cre06.g248950	UBP25	Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
MA_834843g0010	UBP20	Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Ppi_g05909	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0182.g024898	UBP23	not classified & original description: CDS=166-2922	0.03	OrthoFinder output from all 47 species
Sam_g04367	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g17772	No alias	deubiquitinase *(UBP15-21) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e003832_P001	UBP17, Zm00001e003832	deubiquitinase (UBP15-21)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	HCCA
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
MF	GO:0008417	fucosyltransferase activity	IEP	HCCA
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	HCCA
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
BP	GO:1901264	carbohydrate derivative transport	IEP	HCCA
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002893	Znf_MYND	192	229
IPR001394	Peptidase_C19_UCH	324	601

External Links

No external refs found!