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  5. Sacu_v1.1_s0042.g012737

Sacu_v1.1_s0042.g012737 (APO1)


Aliases : APO1

Description : organelle RNA splicing factor *(APO) & original description: CDS=54-1487


Gene families : OG0001840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001840_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0042.g012737
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT1G64810 APO1 Arabidopsis thaliana protein of unknown function (DUF794) 0.04 OrthoFinder output from all 47 species
Adi_g022368 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08217 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04268 APO1 organelle RNA splicing factor *(APO) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58995.t1 APO1, Aspi01Gene58995 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.26G036600.1 emb1629, APO2,... organelle RNA splicing factor *(APO) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g08716 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01018392001 APO1 APO protein 1, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01023615001 emb1629, APO2 APO protein 2, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Ppi_g03107 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05109 APO1 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006942_P002 APO1, Zm00001e006942 APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR023342 APO_dom 69 253
IPR023342 APO_dom 321 454
No external refs found!