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  5. Sacu_v1.1_s0042.g012715

Sacu_v1.1_s0042.g012715


Description : not classified & original description: CDS=1-525


Gene families : OG0000507 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000507_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0042.g012715
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT2G29340 No alias NAD-dependent epimerase/dehydratase family protein 0.03 OrthoFinder output from all 47 species
Dcu_g30214 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Ehy_g18884 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.01 OrthoFinder output from all 47 species
GSVIVT01024887001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
GSVIVT01024893001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
LOC_Os11g43360.1 LOC_Os11g43360 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.06 OrthoFinder output from all 47 species
Lfl_g06419 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Nbi_g26140 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pp3c7_27070V3.1 Pp3c7_27070 NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012724 No alias not classified & original description: CDS=35-859 0.04 OrthoFinder output from all 47 species
Sam_g26586 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Sam_g39324 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Solyc04g007400.4.1 Solyc04g007400 Tropinone reductase 2 OS=Hyoscyamus niger... 0.02 OrthoFinder output from all 47 species
Zm00001e021077_P001 Zm00001e021077 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!