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  5. Sacu_v1.1_s0042.g012673

Sacu_v1.1_s0042.g012673


Description : not classified & original description: CDS=1-1386


Gene families : OG0002239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0042.g012673
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Aob_g03520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G125100.1 Ceric.01G125100 not classified & original description: pacid=50592171... 0.03 OrthoFinder output from all 47 species
Ceric.05G064100.1 Ceric.05G064100 not classified & original description: pacid=50578494... 0.03 OrthoFinder output from all 47 species
Ehy_g05601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
CC GO:0005785 signal recognition particle receptor complex IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR012417 CaM-bd_dom_pln 385 441
No external refs found!