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  5. Sacu_v1.1_s0041.g012588

Sacu_v1.1_s0041.g012588 (ELF8, VIP6)


Aliases : ELF8, VIP6

Description : component *(VIP6/CTR9) of PAF1C transcription initiation and elongation complex & original description: CDS=1-3249


Gene families : OG0004869 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004869_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0041.g012588

Target Alias Description ECC score Gene Family Method Actions
Solyc07g041550.2.1 Solyc07g041550 component VIP6/CTR9 of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 315 342
IPR019734 TPR_repeat 735 761
IPR007318 Phopholipid_MeTrfase 299 376
No external refs found!