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  5. Sacu_v1.1_s0041.g012532

Sacu_v1.1_s0041.g012532


Description : not classified & original description: CDS=128-1231


Gene families : OG0000317 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000317_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0041.g012532
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Aob_g18775 No alias regulatory protein *(SHW) involved in photoreceptor... 0.02 OrthoFinder output from all 47 species
Ceric.09G041400.1 Ceric.09G041400 not classified & original description: pacid=50588091... 0.02 OrthoFinder output from all 47 species
Ehy_g02376 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo113544 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g009480.4.1 Solyc01g009480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g009500.3.1 Solyc09g009500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g009510.4.1 Solyc09g009510 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 84 344
No external refs found!