1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0041.g012510

Sacu_v1.1_s0041.g012510 (EBS)


Aliases : EBS

Description : component *(SHL/EBS) of PRC1 complex & original description: CDS=352-1113


Gene families : OG0000671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000671_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0041.g012510
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00245890 EBS,... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
AMTR_s00151p00046880 EBS,... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13211.t1 EBS, Aspi01Gene13211 component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G075800.1 EBS, Ceric.06G075800 component *(SHL/EBS) of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Cre16.g675246 EBS Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Nbi_g15263 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06722 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11385 No alias component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g049210.3.1 EBS, Solyc07g049210 component BAH of BAH-EMF1 Polycomb silencing complex 0.03 OrthoFinder output from all 47 species
Spa_g25015 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e033007_P001 EBS, Zm00001e033007 component BAH of BAH-EMF1 Polycomb silencing complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR001025 BAH_dom 24 138
IPR019787 Znf_PHD-finger 176 224
No external refs found!