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  5. Sacu_v1.1_s0041.g012505

Sacu_v1.1_s0041.g012505


Description : not classified & original description: CDS=497-2548


Gene families : OG0014990 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014990_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0041.g012505


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004408 holocytochrome-c synthase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
BP GO:0097354 prenylation IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 45 90
IPR002885 Pentatricopeptide_repeat 347 377
IPR002885 Pentatricopeptide_repeat 218 239
IPR002885 Pentatricopeptide_repeat 619 642
IPR002885 Pentatricopeptide_repeat 246 273
IPR002885 Pentatricopeptide_repeat 519 545
IPR002885 Pentatricopeptide_repeat 420 446
IPR002885 Pentatricopeptide_repeat 549 573
IPR002885 Pentatricopeptide_repeat 149 177
IPR002885 Pentatricopeptide_repeat 448 473
No external refs found!