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  5. Sacu_v1.1_s0041.g012500

Sacu_v1.1_s0041.g012500 (ATRGP1, RGP1)


Aliases : ATRGP1, RGP1

Description : UDP-L-arabinose mutase & original description: CDS=168-1190


Gene families : OG0001238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0041.g012500

Target Alias Description ECC score Gene Family Method Actions
AT5G50750 RGP4 reversibly glycosylated polypeptide 4 0.03 OrthoFinder output from all 47 species
Adi_g003302 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06621 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12669 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12775 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0110.g045465 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: CDS=87-1109 0.03 OrthoFinder output from all 47 species
Cre13.g565800 ATRGP1, RGP1 Carbohydrate metabolism.nucleotide sugar... 0.01 OrthoFinder output from all 47 species
Msp_g01532 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15549 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g070390.3.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
Zm00001e006668_P001 Zm00001e006668 UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
Zm00001e012459_P003 RGP2, ATRGP2,... UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
InterPro domains Description Start Stop
IPR037595 RGP_fam 4 338
No external refs found!