Sacu_v1.1_s0040.g012446


Description : component *(NOT3) of mRNA deadenylation CCR4-NOT complex & original description: CDS=968-3298


Gene families : OG0003951 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003951_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0040.g012446

Target Alias Description ECC score Gene Family Method Actions
Dcu_g13304 No alias component *(NOT3) of mRNA deadenylation CCR4-NOT complex... 0.03 OrthoFinder output from all 47 species
MA_16801g0010 No alias component NOT3/5 of mRNA deadenylation CCR4-NOT complex 0.03 OrthoFinder output from all 47 species
Mp1g08720.1 No alias component NOT3/5 of mRNA deadenylation CCR4-NOT complex 0.02 OrthoFinder output from all 47 species
Pir_g07657 No alias component *(NOT3) of mRNA deadenylation CCR4-NOT complex... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005986 sucrose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0050307 sucrose-phosphate phosphatase activity IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR007282 NOT2/3/5_C 636 770
IPR007207 Not_N 21 244
No external refs found!