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  5. Ehy_g06557

Ehy_g06557 (MYB54, ATMYB54)


Aliases : MYB54, ATMYB54

Description : MYB class-R2R3 subgroup-21 transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g06557
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AT1G17950 BW52, ATMYB52, MYB52 myb domain protein 52 0.03 OrthoFinder output from all 47 species
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.02 OrthoFinder output from all 47 species
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.04 OrthoFinder output from all 47 species
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.02 OrthoFinder output from all 47 species
Aev_g16421 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27407 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014830 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Azfi_s3609.g116385 MYB73, ATMYB73 not classified & original description: CDS=1-897 0.02 OrthoFinder output from all 47 species
Cba_g19865 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ceric.23G045000.1 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Cre16.g677382 MYBR1, MYB44,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01009424001 MYBR1, MYB44,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01010006001 BW52, ATMYB52, MYB52 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os03g51110.1 BW52, ATMYB52,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Pnu_g11690 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ppi_g14529 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019382 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021926 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Spa_g31253 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Tin_g23248 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Zm00001e033519_P001 MYBR1, MYB44,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!