1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0039.g012262

Sacu_v1.1_s0039.g012262


Description : Fibrillin plastoglobule core protein *(FBN4) & original description: CDS=1-555


Gene families : OG0007573 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007573_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0039.g012262
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Adi_g009706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G047100.1 Ceric.12G047100 not classified & original description: pacid=50601062... 0.05 OrthoFinder output from all 47 species
Cre03.g188700 No alias Probable plastid-lipid-associated protein 7,... 0.02 OrthoFinder output from all 47 species
LOC_Os04g34460.1 LOC_Os04g34460 no description available(sp|q0jd85|pap7_orysj : 445.0) 0.04 OrthoFinder output from all 47 species
Len_g39721 No alias Fibrillin plastoglobule core protein *(FBN4) & original... 0.03 OrthoFinder output from all 47 species
Sam_g28004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 4 178
No external refs found!