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  5. Sacu_v1.1_s0039.g012230

Sacu_v1.1_s0039.g012230


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: CDS=203-1021


Gene families : OG0001320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0039.g012230
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Spa_g56954 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 226 268
No external refs found!