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  5. Sacu_v1.1_s0039.g012218

Sacu_v1.1_s0039.g012218


Description : not classified & original description: CDS=101-1345


Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0039.g012218
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Aop_g12949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G039500.1 Ceric.13G039500 not classified & original description: pacid=50635975... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000863.14 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.01 OrthoFinder output from all 47 species
LOC_Os05g39680.1 LOC_Os05g39680 component SNX2 of Retromer protein recycling complex 0.02 OrthoFinder output from all 47 species
Ore_g37256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02157 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
InterPro domains Description Start Stop
IPR021825 RETICULATA-related 176 353
No external refs found!