Sacu_v1.1_s0039.g012192


Description : not classified & original description: CDS=121-2313


Gene families : OG0001027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0039.g012192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00238480 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G40070 No alias BEST Arabidopsis thaliana protein match is: proline-rich... 0.02 OrthoFinder output from all 47 species
Adi_g089366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30466 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g76969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_85160g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g14293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g38965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g014490.4.1 Solyc09g014490 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!