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  5. Sacu_v1.1_s0039.g012188

Sacu_v1.1_s0039.g012188


Description : component *(MED15) of tail module of MEDIATOR transcription co-activator complex & original description: CDS=152-3169


Gene families : OG0001744 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001744_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0039.g012188
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Ehy_g06721 No alias component *(MED15) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Gb_25435 No alias component MED15 of tail module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Lfl_g38025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003860_P003 Zm00001e003860 component MED15 of tail module of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006474 N-terminal protein amino acid acetylation IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018206 peptidyl-methionine modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031414 N-terminal protein acetyltransferase complex IEP HCCA
CC GO:0031417 NatC complex IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
InterPro domains Description Start Stop
IPR011692 Stress_up-reg_Nod19 36 377
No external refs found!