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  5. Sacu_v1.1_s0039.g012150

Sacu_v1.1_s0039.g012150


Description : histone demethylase *(JMJD6) & original description: CDS=79-2838


Gene families : OG0001583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0039.g012150

Target Alias Description ECC score Gene Family Method Actions
Cba_g66219 No alias histone demethylase *(JMJD6) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g19075 No alias histone demethylase *(JMJD6) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006906 vesicle fusion IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0016050 vesicle organization IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0048280 vesicle fusion with Golgi apparatus IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0061025 membrane fusion IEP HCCA
BP GO:0090174 organelle membrane fusion IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 18 56
IPR003347 JmjC_dom 239 352
No external refs found!