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  5. Sacu_v1.1_s0039.g012061

Sacu_v1.1_s0039.g012061


Description : not classified & original description: CDS=1-1554


Gene families : OG0001003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001003_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0039.g012061

Target Alias Description ECC score Gene Family Method Actions
AT2G21500 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g023501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012840001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_07419 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_105462g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_436123g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g07676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012826_P001 Zm00001e012826 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!